- Class: 3
- Architecture: 3.40:3-Layer(aba) Sandwich
- Topology: 3.40.1360:Dna Topoisomerase Vi A Subunit; Chain: A, domain 2
- Homology: 3.40.1360.10:
PDB Entries
PDB ID | OPM | Mutant | Chain Formula | Resolution | HETNAM | |||
---|---|---|---|---|---|---|---|---|
Amino Acid sequence | SCOPe Family Level | CATH Homology Level | ||||||
1d3y | [A2] | [A2] | [A2] | 2 | MG:MAGNESIUM ION NA:SODIUM ION | |||
1dd9 | [A] | [A] | [A] | 1.6 | SR:STRONTIUM ION | |||
1dde | [A] | [A] | [A] | 1.7 | Y1:YTTRIUM ION | |||
1eqn | [A] | [A] | [A] | 2.9 | MSE:SELENOMETHIONINE | |||
1q57 | [A7] | [A7] | [A7] | 3.45 | ||||
1t6t | [A2] | [A2] | [A2] | 1.8 | MSE:SELENOMETHIONINE | |||
1vdd | [A4] | [A4] | [A4] | 2.5 | IMD:IMIDAZOLE ZN:ZINC ION | |||
2au3 | [A] | [A] | [A] | 2 | ZN:ZINC ION | |||
2fcj | [A] | [A] | [A] | 1.3 | GOL:GLYCEROL MES:2-(N-MORPHOLINO)-ETHANESULFONIC ACID SO4:SULFATE ION | |||
2i5r | [A] | [A] | [A] | 1.65 | GOL:GLYCEROL MES:2-(N-MORPHOLINO)-ETHANESULFONIC ACID MG:MAGNESIUM ION SO4:SULFATE ION | |||
2q2e | [A2B2] | [A2B2] | [A2B2] | 4 | ||||
2v1c | [A4B2] | [A4B2] | [A4B2] | 3.8 | ZN:ZINC ION | |||
2zbk | [A2B2] | [A2B2] | [A2B2] | 3.56 | RDC:RADICICOL | |||
3b39 | [A](A) | [A](A) | [A](A) | 2.35 | ||||
3vdp | [A2] | [A2] | [A2] | 2.45 | IMD:IMIDAZOLE ZN:ZINC ION | |||
3vdu | [A2] | [A2] | [A2] | 2.8 | ZN:ZINC ION | |||
3ve5 | [A2] | [A2] | [A2] | 2.8 | IMD:IMIDAZOLE ZN:ZINC ION | |||
4e2k | [A] | [A] | [A] | 2.15 | BEN:BENZAMIDINE | |||
4edg | [A] | [A] | [A] | 2 | ATP:ADENOSINE-5___sq___-TRIPHOSPHATE BEN:BENZAMIDINE MN:MANGANESE (II) ION | |||
4edk | [A] | [A] | [A] | 2 | BEN:BENZAMIDINE GTP:GUANOSINE-5___sq___-TRIPHOSPHATE MN:MANGANESE (II) ION | |||
4edr | [A] | [A] | [A] | 2.01 | BEN:BENZAMIDINE MN:MANGANESE (II) ION UTP:URIDINE 5___sq___-TRIPHOSPHATE | |||
4edt | [A] | [A] | [A] | 2 | BEN:BENZAMIDINE G4P:GUANOSINE-5___sq___,3___sq___-TETRAPHOSPHATE MN:MANGANESE (II) ION | |||
4edv | [A] | [A] | [A] | 2.01 | 0O2:GUANOSINE 5___sq___-(TETRAHYDROGEN TRIPHOSPHATE) 3___sq___-(TRIHYDROGEN DIPHOSPHATE) BEN:BENZAMIDINE MN:MANGANESE (II) ION | |||
4ee1 | [A] | [A] | [A] | 2.02 | BEN:BENZAMIDINE CTP:CYTIDINE-5___sq___-TRIPHOSPHATE MN:MANGANESE (II) ION | |||
4jcv | [A4B2] | [A4B2] | [A4B2] | 3.34 | ZN:ZINC ION | |||
4o6o | [A2] | [A2] | [A2] | 3 | IMD:IMIDAZOLE ZN:ZINC ION | |||
4o6p | [A2] | [A2] | [A2] | 3 | ZN:ZINC ION | |||
5guj | [A] | [A] | [A] | 2.5 | ||||
5vaz | [A] | [A] | [A] | 2.4 | SO4:SULFATE ION | |||
5z2v | [A2] | [A2] | [A2] | 2.2 | GOL:GLYCEROL NA:SODIUM ION PO4:PHOSPHATE ION ZN:ZINC ION | |||
5zvq | [A2] | [A2] | [A2] | 2.5 | CL:CHLORIDE ION ZN:ZINC ION |
*Chain Formula of OLIGAMI.
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA